STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007440Nuclear receptor corepressor 2. (2320 aa)    
Predicted Functional Partners:
ENSGMOP00000001496
Histone deacetylase 3.
    
 0.982
ENSGMOP00000003469
annotation not available
    
 0.952
HDAC1
Histone deacetylase 1.
    
 0.952
HDAC2
Histone deacetylase 2.
    
 0.948
ENSGMOP00000003076
Progesterone receptor.
    
 0.936
ENSGMOP00000020687
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.933
ENSGMOP00000014497
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.932
ENSGMOP00000010130
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.928
ENSGMOP00000016244
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.922
ENSGMOP00000004055
Transformation/transcription domain-associated protein.
   
 0.921
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.