STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007460EMSY transcriptional repressor, BRCA2 interacting. (1153 aa)    
Predicted Functional Partners:
ENSGMOP00000015018
PHD finger protein 12b.
   
 
 0.903
gatad1
GATA zinc finger domain containing 1.
    
 
 0.831
ENSGMOP00000014618
SIN3 transcription regulator family member B.
    
 
 0.766
ENSGMOP00000001506
annotation not available
   
 
 0.756
LOC115551199
Mortality factor 4-like protein 1.
   
 
 0.756
ENSGMOP00000009117
SIN3 transcription regulator family member Ab.
    
 
 0.743
ENSGMOP00000009882
SIN3 transcription regulator family member Aa.
    
 
 0.743
CBX1
Chromobox 1.
    
 
 0.702
ENSGMOP00000009954
annotation not available
    
 
 0.702
ENSGMOP00000014229
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
    
 
 0.702
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.