STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007599Clusterin-like 1 (retinal). (481 aa)    
Predicted Functional Partners:
ENSGMOP00000005889
Interphotoreceptor retinoid-binding protein like.
   
  
 0.876
ENSGMOP00000005903
Retinol binding protein 3.
   
  
 0.876
ENSGMOP00000001117
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
    0.860
ENSGMOP00000019411
Opsin 1 (cone pigments), short-wave-sensitive 2.
   
    0.839
LOC115556569
Blue-sensitive opsin-like.
   
    0.839
ENSGMOP00000003521
Guanylate cyclase activator 1A.
   
    0.720
LOC115557807
Guanylyl cyclase-activating protein 1-like.
   
    0.720
ENSGMOP00000014473
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.716
ENSGMOP00000010682
Complement component 6.
   
 0.678
APP
Amyloid beta precursor protein.
   
 0.584
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.