STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007696Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (687 aa)    
Predicted Functional Partners:
ENSGMOP00000013771
TAP binding protein (tapasin), tandem duplicate 2.
   
 0.947
ENSGMOP00000020658
Protein disulfide isomerase family A, member 3.
  
 0.895
ENSGMOP00000015334
Calreticulin.
   
 0.892
ENSGMOP00000006091
annotation not available
  
 
0.880
ENSGMOP00000009312
annotation not available
   
 0.879
ENSGMOP00000013388
Calreticulin 3b.
   
 0.879
ENSGMOP00000004688
annotation not available
  
  0.877
ENSGMOP00000000616
Transporter associated with antigen processing, subunit type t, teleost specific.
  
  
0.858
ENSGMOP00000001559
annotation not available
 
   
0.841
ENSGMOP00000014592
Katanin p60 subunit A-like 2.
  
 0.708
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.