STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007752annotation not available (340 aa)    
Predicted Functional Partners:
ykt6
YKT6 v-SNARE homolog.
     
 0.831
ENSGMOP00000002602
Golgi SNAP receptor complex member 1.
     
 0.830
ENSGMOP00000015972
Ribosomal protein L23a.
    
   0.809
ENSGMOP00000020870
Nuclear transcription factor Y, beta a.
   
    0.797
ENSGMOP00000008696
Mitochondrial ribosomal protein L20.
    
 
 0.694
ENSGMOP00000017825
Mitochondrial ribosome recycling factor.
    
 
 0.681
ENSGMOP00000014651
Mitochondrial ribosomal protein L19.
   
 
 0.667
ENSGMOP00000019739
Mitochondrial ribosomal protein L2.
   
 
 0.661
ENSGMOP00000005220
Mitochondrial ribosomal protein L11.
    
 
 0.656
rps18
Ribosomal protein S18.
   
   0.655
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.