STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ormdl2ORMDL sphingolipid biosynthesis regulator 2. (153 aa)    
Predicted Functional Partners:
sptlc1
Serine palmitoyltransferase long chain base subunit 1.
    
 
 0.889
ENSGMOP00000007335
Serine palmitoyltransferase, small subunit A.
    
 
 0.733
ENSGMOP00000001832
Serine palmitoyltransferase, long chain base subunit 2b.
    
 
 0.690
ENSGMOP00000001847
Isthmin 2b.
    
 
 0.690
ENSGMOP00000020401
Serine palmitoyltransferase, long chain base subunit 3.
    
 
 0.690
ENSGMOP00000020416
Isthmin 1.
    
 
 0.690
ENSGMOP00000002974
annotation not available
    
 
 0.621
ENSGMOP00000003784
Aminolevulinate, delta-, synthase 1.
    
 
 0.621
ENSGMOP00000009940
Glycine C-acetyltransferase.
    
 
 0.621
ENSGMOP00000017242
Aminolevulinate, delta-, synthase 2.
    
 
 0.621
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.