STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX18Sorting nexin 18. (572 aa)    
Predicted Functional Partners:
ENSGMOP00000017805
Cyclin G associated kinase.
     
 0.981
ENSGMOP00000013909
Sorting nexin 9b.
  
 
0.895
ENSGMOP00000000052
Si:rp71-17i16.5.
    
  0.856
ENSGMOP00000000741
Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta.
    
  0.856
LOC115548750
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform.
    
  0.856
ENSGMOP00000009961
Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma.
    
  0.856
ENSGMOP00000014980
Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta.
    
  0.856
ENSGMOP00000009908
Sorting nexin 33.
  
  
 
0.845
ENSGMOP00000010175
annotation not available
  
  
 
0.845
ENSGMOP00000009146
annotation not available
    
  0.842
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.