STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007966Nuclear receptor coactivator 6. (1408 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.995
bysl
Bystin like.
   
 0.992
ENSGMOP00000011066
TSR1 ribosome maturation factor.
   
 0.985
ENSGMOP00000011394
NIN1 (RPN12) binding protein 1 homolog.
   
 0.981
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.977
ENSGMOP00000012144
RIO kinase 2 (yeast).
   
 0.976
ENSGMOP00000005564
LTV1 ribosome biogenesis factor.
   
 0.975
ENSGMOP00000008125
Apoptosis antagonizing transcription factor.
   
 
 0.975
ENSGMOP00000017748
PWP2 small subunit processome component.
   
 
 0.970
ENSGMOP00000015989
HEAT repeat containing 1.
   
 
 0.966
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.