STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000007974tRNA nucleotidyl transferase, CCA-adding, 1. (426 aa)    
Predicted Functional Partners:
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
 0.883
ENSGMOP00000000627
Adipocyte plasma membrane associated protein.
  
 0.881
ENSGMOP00000003024
Zgc:194209.
  
 0.881
ENSGMOP00000003185
DIS3 like exosome 3'-5' exoribonuclease.
  
 0.762
ENSGMOP00000007029
DIS3 like 3'-5' exoribonuclease 2.
  
 0.762
ENSGMOP00000017263
Holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase).
  
  
 0.762
ENSGMOP00000019926
DIS3 exosome endoribonuclease and 3'-5' exoribonuclease.
  
 0.762
ENSGMOP00000016949
annotation not available
  
 0.760
ENSGMOP00000007026
TELO2 interacting protein 1.
    
 
 0.751
ENSGMOP00000006968
tyrosyl-tRNA synthetase 1.
  
 
 0.728
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.