ENSGMOP00000008034 protein (Gadus morhua) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGMOP00000008034

annotation not available (397 aa)

Predicted Functional Partners:

ENSGMOP00000012227

0.611

PYY

0.608

npy

0.595

ENSGMOP00000005181

0.594

ENSGMOP00000015627

0.588

ENSGMOP00000013738

0.576

GNG4

0.576

ENSGMOP00000021315

0.567

LOC115530911

0.560

LOC115535552

0.558

Your Current Organism:

Gadus morhua

NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGMOP00000005181	ENSGMOP00000008034	ENSGMOP00000005181	ENSGMOP00000008034	Usher syndrome 1C.	annotation not available	0.594
ENSGMOP00000008034	ENSGMOP00000005181	ENSGMOP00000008034	ENSGMOP00000005181	annotation not available	Usher syndrome 1C.	0.594
ENSGMOP00000008034	ENSGMOP00000012227	ENSGMOP00000008034	ENSGMOP00000012227	annotation not available	Endothelin 1.	0.611
ENSGMOP00000008034	ENSGMOP00000013738	ENSGMOP00000008034	ENSGMOP00000013738	annotation not available	Guanine nucleotide binding protein (G protein), gamma 2.	0.576
ENSGMOP00000008034	ENSGMOP00000015627	ENSGMOP00000008034	ENSGMOP00000015627	annotation not available	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3.	0.588
ENSGMOP00000008034	ENSGMOP00000021315	ENSGMOP00000008034	ENSGMOP00000021315	annotation not available	annotation not available	0.567
ENSGMOP00000008034	GNG4	ENSGMOP00000008034	ENSGMOP00000020104	annotation not available	G protein subunit gamma 4.	0.576
ENSGMOP00000008034	LOC115530911	ENSGMOP00000008034	ENSGMOP00000016490	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2-like.	0.560
ENSGMOP00000008034	LOC115535552	ENSGMOP00000008034	ENSGMOP00000010845	annotation not available	Guanine nucleotide-binding protein G(T) subunit gamma-T1-like.	0.558
ENSGMOP00000008034	PYY	ENSGMOP00000008034	ENSGMOP00000018847	annotation not available	Peptide YY.	0.608
ENSGMOP00000008034	npy	ENSGMOP00000008034	ENSGMOP00000014649	annotation not available	Neuropeptide Y; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	0.595
ENSGMOP00000012227	ENSGMOP00000008034	ENSGMOP00000012227	ENSGMOP00000008034	Endothelin 1.	annotation not available	0.611
ENSGMOP00000012227	ENSGMOP00000015627	ENSGMOP00000012227	ENSGMOP00000015627	Endothelin 1.	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3.	0.585
ENSGMOP00000012227	ENSGMOP00000021315	ENSGMOP00000012227	ENSGMOP00000021315	Endothelin 1.	annotation not available	0.890
ENSGMOP00000013738	ENSGMOP00000008034	ENSGMOP00000013738	ENSGMOP00000008034	Guanine nucleotide binding protein (G protein), gamma 2.	annotation not available	0.576
ENSGMOP00000013738	ENSGMOP00000015627	ENSGMOP00000013738	ENSGMOP00000015627	Guanine nucleotide binding protein (G protein), gamma 2.	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3.	0.806
ENSGMOP00000013738	LOC115530911	ENSGMOP00000013738	ENSGMOP00000016490	Guanine nucleotide binding protein (G protein), gamma 2.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2-like.	0.863
ENSGMOP00000013738	LOC115535552	ENSGMOP00000013738	ENSGMOP00000010845	Guanine nucleotide binding protein (G protein), gamma 2.	Guanine nucleotide-binding protein G(T) subunit gamma-T1-like.	0.859
ENSGMOP00000013738	npy	ENSGMOP00000013738	ENSGMOP00000014649	Guanine nucleotide binding protein (G protein), gamma 2.	Neuropeptide Y; NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone; Belongs to the NPY family.	0.603
ENSGMOP00000015627	ENSGMOP00000008034	ENSGMOP00000015627	ENSGMOP00000008034	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3.	annotation not available	0.588