STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008163pre-B-cell leukemia homeobox 1b. (417 aa)    
Predicted Functional Partners:
ENSGMOP00000010603
Meis homeobox 2a.
   
0.897
ENSGMOP00000019211
Homeobox C9a.
    
 
 0.816
ENSGMOP00000003326
Homeobox B1b.
    
 0.773
ENSGMOP00000010598
Homeobox B1a.
    
 0.773
ENSGMOP00000010551
Homeobox B8a.
    
 0.740
hoxc8
Homeobox C8.
    
 0.740
ENSGMOP00000014762
Homeobox A1a.
    
 0.737
ENSGMOP00000003354
Homeobox B5b.
    
 0.730
ENSGMOP00000020602
annotation not available
    
 0.730
ENSGMOP00000003370
Homeobox B6a.
    
 0.723
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.