STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008174Checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase. (572 aa)    
Predicted Functional Partners:
ENSGMOP00000008056
OS9 endoplasmic reticulum lectin.
   
 0.851
ENSGMOP00000017427
Endoplasmic reticulum lectin 1.
   
 0.851
ENSGMOP00000005233
Valosin containing protein.
    
 0.833
ENSGMOP00000011826
annotation not available
    
 0.833
ENSGMOP00000016120
Spermatogenesis associated 5-like 1.
    
 0.833
ENSGMOP00000009205
Derlin 2.
    
 0.832
ENSGMOP00000010111
Derlin 1.
    
 0.832
ENSGMOP00000020710
Derlin 3.
    
 0.832
ENSGMOP00000016022
Poly (ADP-ribose) polymerase 1.
    
 
 0.827
ENSGMOP00000014592
Katanin p60 subunit A-like 2.
    
 0.816
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.