STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008216Ankyrin repeat and LEM domain containing 2. (847 aa)    
Predicted Functional Partners:
ENSGMOP00000009097
annotation not available
   
  0.864
ENSGMOP00000002583
VRK serine/threonine kinase 2.
   
 0.850
ENSGMOP00000012761
VRK serine/threonine kinase 1.
   
 0.850
banf1
Barrier to autointegration factor 1.
    
 0.829
ENSGMOP00000021849
annotation not available
    
 0.829
ENSGMOP00000003468
annotation not available
    
  0.764
ENSGMOP00000017459
annotation not available
    
  0.764
ENSGMOP00000017473
Protein phosphatase 2, catalytic subunit, alpha isozyme.
    
  0.764
ENSGMOP00000004980
Protein phosphatase 2, regulatory subunit B, alpha a.
    
 0.758
ENSGMOP00000015228
Sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae).
    
 0.758
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.