STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008403annotation not available (1474 aa)    
Predicted Functional Partners:
ENSGMOP00000011856
annotation not available
    
 0.941
ENSGMOP00000000516
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.940
LOC115531057
Transforming protein RhoA-like.
    
 0.895
LOC115553663
Rho-related GTP-binding protein RhoA-D.
    
 0.895
LOC115557462
Rho-related GTP-binding protein RhoA-B.
    
 0.895
ENSGMOP00000018454
annotation not available
    
 0.895
ENSGMOP00000013931
V-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog.
    
 0.859
ENSGMOP00000013958
annotation not available
    
 0.859
ENSGMOP00000008068
Rho GTPase activating protein 5.
  
  
 
0.845
ENSGMOP00000000047
Rho GTPase activating protein 35b.
  
  
 
0.843
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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