STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008423tRNA methyltransferase 44 homolog. (542 aa)    
Predicted Functional Partners:
ENSGMOP00000008716
Pseudouridine synthase 1.
   
  
 0.688
ENSGMOP00000011834
tRNA methyltransferase 6.
   
  
 0.681
ENSGMOP00000002202
Methyltransferase like 1.
   
  
 0.678
ENSGMOP00000012179
tRNA methyltransferase 61A.
   
  
 0.626
ENSGMOP00000004844
FtsJ RNA 2'-O-methyltransferase 1.
   
  
 0.609
ENSGMOP00000014151
tRNA methyltransferase 13 homolog.
   
  
 0.587
ENSGMOP00000004813
Pseudouridylate synthase 3.
   
  
 0.560
ENSGMOP00000019530
WD repeat domain 4.
   
  
 0.556
ENSGMOP00000020776
WD repeat domain 6.
   
  
 0.556
ENSGMOP00000004893
Si:dkey-85a20.4.
   
  
 0.555
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.