STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008430Coatomer protein complex, subunit beta 2. (900 aa)    
Predicted Functional Partners:
ENSGMOP00000001349
Coatomer protein complex, subunit beta 1.
   
 0.997
ENSGMOP00000011746
Archain 1b.
   
 0.995
ENSGMOP00000020011
Coatomer protein complex, subunit alpha.
   
0.995
ENSGMOP00000012748
Coatomer protein complex, subunit gamma 2.
   
 0.991
ENSGMOP00000014448
Coatomer protein complex, subunit epsilon.
   
 0.983
ENSGMOP00000010027
ADP-ribosylation factor GTPase activating protein 3.
   
 0.946
ENSGMOP00000015934
ADP-ribosylation factor GTPase activating protein 2.
   
 0.946
ENSGMOP00000019347
Coatomer protein complex, subunit zeta 1.
   
 0.944
ENSGMOP00000004759
Coatomer protein complex, subunit zeta 2.
   
 0.941
ENSGMOP00000021637
Proline rich 15 like b.
   
 0.941
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.