STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008437Importin 9. (1042 aa)    
Predicted Functional Partners:
ENSGMOP00000002621
Nucleosome assembly protein 1-like 1.
   
 
 0.881
ENSGMOP00000019206
Nucleosome assembly protein 1-like 4b.
   
 
 0.881
ENSGMOP00000008882
Uridine monophosphate synthetase.
   
 
  0.852
ENSGMOP00000005173
TATA box binding protein like 2.
    
 
 0.801
ENSGMOP00000013314
TATA box binding protein.
    
 
 0.801
ENSGMOP00000008713
Splicing factor 3b, subunit 3.
   
    0.781
LOC115546069
Histone H2A.V.
    
 
 0.738
H2AZ1
H2A.Z variant histone 1.
    
 
 0.738
ENSGMOP00000000153
Karyopherin (importin) beta 3.
   
 
 0.716
ENSGMOP00000007249
Adhesion G protein-coupled receptor D1.
   
 
 0.716
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.