ENSGMOP00000008524 protein (Gadus morhua) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGMOP00000008524

annotation not available (193 aa)

Predicted Functional Partners:

ENSGMOP00000016928

0.899

ENSGMOP00000010080

0.870

ENSGMOP00000003676

0.862

ENSGMOP00000014543

0.861

ENSGMOP00000004352

0.859

ENSGMOP00000013521

0.859

ENSGMOP00000008233

0.852

ENSGMOP00000019204

0.849

ENSGMOP00000018983

0.847

ENSGMOP00000014832

0.837

Your Current Organism:

Gadus morhua

NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSGMOP00000003676	ENSGMOP00000004352	Enoyl CoA hydratase, short chain, 1, mitochondrial.	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	0.928
ENSGMOP00000003676	ENSGMOP00000008233	Enoyl CoA hydratase, short chain, 1, mitochondrial.	3-oxoacid CoA transferase 1a.	0.804
ENSGMOP00000003676	ENSGMOP00000008524	Enoyl CoA hydratase, short chain, 1, mitochondrial.	annotation not available	0.862
ENSGMOP00000003676	ENSGMOP00000010080	Enoyl CoA hydratase, short chain, 1, mitochondrial.	annotation not available	0.930
ENSGMOP00000003676	ENSGMOP00000013521	Enoyl CoA hydratase, short chain, 1, mitochondrial.	3-hydroxyisobutyryl-CoA hydrolase.	0.926
ENSGMOP00000003676	ENSGMOP00000014543	Enoyl CoA hydratase, short chain, 1, mitochondrial.	Aldehyde dehydrogenase 7 family, member A1.	0.870
ENSGMOP00000003676	ENSGMOP00000016928	Enoyl CoA hydratase, short chain, 1, mitochondrial.	Dehydrogenase/reductase (SDR family) member 4.	0.626
ENSGMOP00000003676	ENSGMOP00000018983	Enoyl CoA hydratase, short chain, 1, mitochondrial.	acyl-CoA oxidase 1, palmitoyl.	0.966
ENSGMOP00000003676	ENSGMOP00000019204	Enoyl CoA hydratase, short chain, 1, mitochondrial.	acyl-CoA oxidase 3, pristanoyl.	0.962
ENSGMOP00000004352	ENSGMOP00000003676	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	Enoyl CoA hydratase, short chain, 1, mitochondrial.	0.928
ENSGMOP00000004352	ENSGMOP00000008233	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	3-oxoacid CoA transferase 1a.	0.905
ENSGMOP00000004352	ENSGMOP00000008524	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	annotation not available	0.859
ENSGMOP00000004352	ENSGMOP00000010080	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	annotation not available	0.953
ENSGMOP00000004352	ENSGMOP00000013521	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	3-hydroxyisobutyryl-CoA hydrolase.	0.861
ENSGMOP00000004352	ENSGMOP00000014543	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	Aldehyde dehydrogenase 7 family, member A1.	0.819
ENSGMOP00000004352	ENSGMOP00000016928	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	Dehydrogenase/reductase (SDR family) member 4.	0.691
ENSGMOP00000004352	ENSGMOP00000018983	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	acyl-CoA oxidase 1, palmitoyl.	0.950
ENSGMOP00000004352	ENSGMOP00000019204	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	acyl-CoA oxidase 3, pristanoyl.	0.949
ENSGMOP00000008233	ENSGMOP00000003676	3-oxoacid CoA transferase 1a.	Enoyl CoA hydratase, short chain, 1, mitochondrial.	0.804
ENSGMOP00000008233	ENSGMOP00000004352	3-oxoacid CoA transferase 1a.	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b.	0.905