STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008555EPS8-like 3a. (515 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.821
ENSGMOP00000017627
annotation not available
    
 0.821
ENSGMOP00000002700
Myosin IIIB.
   
 0.560
ENSGMOP00000016808
Myosin IIIA.
   
 0.560
ENSGMOP00000000686
annotation not available
    
 0.500
ENSGMOP00000005962
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1.
    
 0.500
ENSGMOP00000013257
Calcium/calmodulin-dependent protein kinase II alpha.
    
 0.500
ENSGMOP00000005181
Usher syndrome 1C.
   
 
 0.441
ENSGMOP00000002472
Membrane protein, palmitoylated 4-like.
    
 0.421
ENSGMOP00000002652
Transmembrane protein 237b.
    
 0.421
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.