STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008558Solute carrier family 2 member 6. (465 aa)    
Predicted Functional Partners:
ENSGMOP00000019425
annotation not available
   
 0.680
ENSGMOP00000009090
Ribosomal protein S17.
    
 
 0.659
ENSGMOP00000010582
Mitochondrial ribosomal protein L43.
    
 
 0.658
ENSGMOP00000006253
Mitochondrial ribosomal protein L15.
   
   0.657
ENSGMOP00000005525
Adaptor related protein complex 2 subunit beta 1.
    
  0.656
ENSGMOP00000013118
Adaptor related protein complex 1 subunit beta 1.
    
  0.656
ENSGMOP00000018949
Glucosidase, beta (bile acid) 2.
    
 0.656
ENSGMOP00000001630
Mitochondrial ribosomal protein S16.
   
 
 0.654
ENSGMOP00000020010
Mitochondrial ribosomal protein L46.
    
 
 0.654
ENSGMOP00000003062
CF transmembrane conductance regulator.
    
 0.653
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.