ENSGMOP00000008604 protein (Gadus morhua) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGMOP00000008604

Striatin, calmodulin binding protein 4. (702 aa)

Predicted Functional Partners:

ENSGMOP00000015040

0.808

ENSGMOP00000009097

0.786

ENSGMOP00000021128

0.779

ENSGMOP00000008602

0.777

ENSGMOP00000020881

0.775

ENSGMOP00000002036

0.770

ENSGMOP00000004868

0.756

ENSGMOP00000008388

0.735

ENSGMOP00000003564

0.727

ENSGMOP00000003660

0.705

Your Current Organism:

Gadus morhua

NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSGMOP00000002036	ENSGMOP00000003564	Striatin interacting protein 2.	CTTNBP2 N-terminal like b.	0.823
ENSGMOP00000002036	ENSGMOP00000003660	Striatin interacting protein 2.	Sarcolemma associated protein a.	0.876
ENSGMOP00000002036	ENSGMOP00000004868	Striatin interacting protein 2.	Cortactin binding protein 2.	0.863
ENSGMOP00000002036	ENSGMOP00000008388	Striatin interacting protein 2.	CTTNBP2 N-terminal like a.	0.823
ENSGMOP00000002036	ENSGMOP00000008604	Striatin interacting protein 2.	Striatin, calmodulin binding protein 4.	0.770
ENSGMOP00000002036	ENSGMOP00000009097	Striatin interacting protein 2.	annotation not available	0.917
ENSGMOP00000002036	ENSGMOP00000020881	Striatin interacting protein 2.	FGFR1 oncogene partner 2.	0.887
ENSGMOP00000003564	ENSGMOP00000002036	CTTNBP2 N-terminal like b.	Striatin interacting protein 2.	0.823
ENSGMOP00000003564	ENSGMOP00000004868	CTTNBP2 N-terminal like b.	Cortactin binding protein 2.	0.901
ENSGMOP00000003564	ENSGMOP00000008602	CTTNBP2 N-terminal like b.	Striatin interacting protein 1.	0.823
ENSGMOP00000003564	ENSGMOP00000008604	CTTNBP2 N-terminal like b.	Striatin, calmodulin binding protein 4.	0.727
ENSGMOP00000003564	ENSGMOP00000009097	CTTNBP2 N-terminal like b.	annotation not available	0.834
ENSGMOP00000003660	ENSGMOP00000002036	Sarcolemma associated protein a.	Striatin interacting protein 2.	0.876
ENSGMOP00000003660	ENSGMOP00000004868	Sarcolemma associated protein a.	Cortactin binding protein 2.	0.552
ENSGMOP00000003660	ENSGMOP00000008602	Sarcolemma associated protein a.	Striatin interacting protein 1.	0.876
ENSGMOP00000003660	ENSGMOP00000008604	Sarcolemma associated protein a.	Striatin, calmodulin binding protein 4.	0.705
ENSGMOP00000003660	ENSGMOP00000009097	Sarcolemma associated protein a.	annotation not available	0.919
ENSGMOP00000003660	ENSGMOP00000020881	Sarcolemma associated protein a.	FGFR1 oncogene partner 2.	0.951
ENSGMOP00000004868	ENSGMOP00000002036	Cortactin binding protein 2.	Striatin interacting protein 2.	0.863
ENSGMOP00000004868	ENSGMOP00000003564	Cortactin binding protein 2.	CTTNBP2 N-terminal like b.	0.901