STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008627Tubulin folding cofactor B. (245 aa)    
Predicted Functional Partners:
ENSGMOP00000012507
Tubulin folding cofactor E.
    
 0.866
trappc4
Trafficking protein particle complex 4.
   
    0.793
ENSGMOP00000008833
Tubulin folding cofactor D.
    
 0.775
ENSGMOP00000014159
alanyl-tRNA synthetase domain containing 1.
   
 
 0.680
GAN
Gigaxonin.
    
 
 0.678
ENSGMOP00000008987
Tubulin cofactor a.
   
 
 0.648
arl2
ADP ribosylation factor like GTPase 2.
   
  
 0.631
ENSGMOP00000010380
Dynactin 3 (p22).
   
    0.612
ENSGMOP00000004371
Tubulin folding cofactor C.
      
 0.565
LOC115533159
Tubulin alpha chain.
   
 0.512
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.