STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008889Fibronectin 1a. (2443 aa)    
Predicted Functional Partners:
ENSGMOP00000014489
Integrin, alpha 8.
    
 0.935
ENSGMOP00000000189
Integrin beta 3a.
    
 0.928
ENSGMOP00000011665
annotation not available
    
 0.928
ENSGMOP00000000540
Integrin, beta 6.
    
 0.920
ENSGMOP00000002944
Integrin, beta 5.
    
 0.915
ENSGMOP00000002985
Integrin, beta 1a.
    
 0.904
ENSGMOP00000017523
Integrin, beta 1b.
    
 0.904
ENSGMOP00000005232
annotation not available
    
 0.903
ENSGMOP00000008035
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide).
    
 0.903
ENSGMOP00000016938
Integrin, alpha V.
    
 0.903
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.