STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
man2c1Mannosidase alpha class 2C member 1. (1019 aa)    
Predicted Functional Partners:
ENSGMOP00000007014
Mannosidase, alpha, class 2B, member 1.
     
 0.896
ENSGMOP00000014658
Mannosidase, alpha, class 2B, member 2.
     
 0.896
ENSGMOP00000011415
Mannosidase, alpha, class 2A, member 2.
     
0.870
ENSGMOP00000014422
Cyclin B1 interacting protein 1.
     
 0.848
ENSGMOP00000002365
endo-beta-N-acetylglucosaminidase.
  
  
 0.838
ENSGMOP00000019308
Mannosyl-oligosaccharide glucosidase.
   
  
 0.783
ENSGMOP00000000456
Mindbomb E3 ubiquitin protein ligase 2.
   
 
 0.684
ENSGMOP00000000046
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
  
 0.680
ENSGMOP00000002925
NBR1 autophagy cargo receptor a.
   
 
 0.648
ENSGMOP00000008978
NBR1 autophagy cargo receptor b.
   
 
 0.648
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.