STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008906Nei-like DNA glycosylase 1. (294 aa)    
Predicted Functional Partners:
ENSGMOP00000012374
Polymerase (DNA directed), beta.
   
 0.886
ENSGMOP00000013783
X-ray repair complementing defective repair in Chinese hamster cells 1.
    
 0.855
ENSGMOP00000018157
8-oxoguanine DNA glycosylase.
     
 0.830
ENSGMOP00000012613
Polynucleotide kinase 3'-phosphatase.
     
 0.817
ENSGMOP00000016769
Polymerase (DNA directed), lambda.
   
 0.787
ENSGMOP00000003531
Ligase III, DNA, ATP-dependent.
    
 0.754
ENSGMOP00000010941
annotation not available
   
 0.700
ENSGMOP00000012381
Enkurin domain containing 1.
   
 0.700
ENSGMOP00000015555
Polymerase (DNA directed), mu.
   
 0.700
ENSGMOP00000003984
Ligase I, DNA, ATP-dependent.
    
 0.695
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.