STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000008974Prothymosin alpha a. (109 aa)    
Predicted Functional Partners:
rps3
Ribosomal protein S3.
   
  
 0.859
rpl15
Ribosomal protein L15.
   
    0.832
ENSGMOP00000002892
Ribosomal protein L13.
   
    0.815
ENSGMOP00000003270
annotation not available
   
    0.803
ENSGMOP00000015972
Ribosomal protein L23a.
   
    0.799
ENSGMOP00000018936
Ribosomal protein, large, P0.
   
    0.793
rps9
Ribosomal protein S9.
   
    0.792
rpl18a
Ribosomal protein L18a.
   
    0.791
ENSGMOP00000019324
Ribosomal protein L32.
   
  
 0.790
rps18
Ribosomal protein S18.
   
    0.787
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.