STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009058Latent transforming growth factor beta binding protein 1. (1321 aa)    
Predicted Functional Partners:
ENSGMOP00000019803
Transforming growth factor, beta 1a.
   
 0.874
TGFB3
Transforming growth factor beta 3.
   
 0.772
ENSGMOP00000009451
Transforming growth factor, beta 5.
   
 0.771
ENSGMOP00000016328
Transforming growth factor, beta 3.
   
 0.757
ENSGMOP00000017161
annotation not available
   
 
 0.729
ENSGMOP00000018664
Transforming growth factor, beta 2.
   
 0.724
ENSGMOP00000015757
Thrombospondin 1b.
   
 
 0.719
ENSGMOP00000000540
Integrin, beta 6.
    
 0.663
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.611
ENSGMOP00000000890
annotation not available
   
 0.601
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.