STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c22h6orf62Chromosome 22 C6orf62 homolog. (230 aa)    
Predicted Functional Partners:
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
   
    0.574
LOC115543833
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
   
    0.574
ENSGMOP00000015200
annotation not available
   
    0.574
ENSGMOP00000006217
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
      
 0.474
ENSGMOP00000009142
annotation not available
      
 0.463
ENSGMOP00000009082
tyrosyl-DNA phosphodiesterase 2b.
 
    
 0.428
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.