STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009111Cyclin-dependent kinase 20. (340 aa)    
Predicted Functional Partners:
ENSGMOP00000000533
Cyclin H.
    
 0.978
mnat1
MNAT1 component of CDK activating kinase.
   
 0.965
ENSGMOP00000004549
Excision repair cross-complementation group 2.
    
 0.962
gtf2h3
General transcription factor IIH subunit 3.
    
 0.962
ENSGMOP00000005310
General transcription factor IIE, polypeptide 2, beta.
   
 0.957
ENSGMOP00000006048
General transcription factor IIH, polypeptide 2.
   
 0.954
ENSGMOP00000019408
Excision repair cross-complementation group 3.
    
 0.954
ENSGMOP00000008393
General transcription factor IIE, polypeptide 1, alpha.
    
 0.953
gtf2h1
General transcription factor IIH subunit 1.
   
 0.953
ENSGMOP00000009074
General transcription factor IIH, polypeptide 4.
    
 0.951
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.