STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txnl4bThioredoxin like 4B. (149 aa)    
Predicted Functional Partners:
ENSGMOP00000009063
Small nuclear ribonucleoprotein D3 polypeptide, like.
   
  0.980
ENSGMOP00000005227
Small nuclear ribonucleoprotein 200 (U5).
    
 0.976
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 0.976
ENSGMOP00000016770
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
    
 0.976
ENSGMOP00000002222
pre-mRNA processing factor 8.
    
 0.974
ENSGMOP00000006612
Small nuclear ribonucleoprotein polypeptide G.
   
 0.970
ENSGMOP00000008279
Small nuclear ribonucleoprotein polypeptide F.
   
  0.962
ENSGMOP00000005677
PRP31 pre-mRNA processing factor 31 homolog (yeast).
    
 0.960
ENSGMOP00000010255
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.
    
 0.957
ENSGMOP00000021147
Polyglutamine binding protein 1.
   
 0.956
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.