STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009174tRNA methyltransferase 10C, mitochondrial RNase P subunit. (343 aa)    
Predicted Functional Partners:
ENSGMOP00000010756
Hydroxysteroid (17-beta) dehydrogenase 10.
    
 0.988
ENSGMOP00000018717
Protein only RNase P catalytic subunit.
   
 0.984
ENSGMOP00000017467
Ribosome production factor 1 homolog.
   
  
 0.901
ENSGMOP00000002202
Methyltransferase like 1.
   
 
 0.803
ENSGMOP00000003407
Nucleolar protein interacting with the FHA domain of MKI67.
   
   0.771
ENSGMOP00000006178
annotation not available
   
 
 0.768
ENSGMOP00000011176
Solute carrier family 47 member 3.
   
 0.756
ENSGMOP00000011200
Solute carrier family 47 member 4.
   
 0.756
ENSGMOP00000012623
annotation not available
   
 0.756
ENSGMOP00000015086
annotation not available
   
 0.756
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.