STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009197Excision repair cross-complementation group 5. (786 aa)    
Predicted Functional Partners:
gtf2h1
General transcription factor IIH subunit 1.
    
 0.973
ENSGMOP00000003846
Excision repair cross-complementation group 6.
  
 0.963
ENSGMOP00000019408
Excision repair cross-complementation group 3.
   
 0.963
ENSGMOP00000004549
Excision repair cross-complementation group 2.
  
 0.960
pcna
Proliferating cell nuclear antigen.
  
 0.960
ENSGMOP00000009249
MUS81 structure-specific endonuclease subunit.
   
 0.945
ENSGMOP00000002246
annotation not available
   
 0.935
ENSGMOP00000006048
General transcription factor IIH, polypeptide 2.
    
 0.933
ENSGMOP00000000598
Excision repair cross-complementation group 4.
   
 0.923
ENSGMOP00000013757
MRE11 homolog A, double strand break repair nuclease.
  
 0.913
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.