STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scaiSuppressor of cancer cell invasion. (565 aa)    
Predicted Functional Partners:
ENSGMOP00000004771
Mitochondrial ribosomal protein L23.
      
 0.541
ENSGMOP00000019691
EEF1A lysine methyltransferase 2.
      
 0.516
ENSGMOP00000004943
Mitogen-activated protein kinase kinase kinase 3.
   
 
  0.512
ENSGMOP00000007406
Mitogen-activated protein kinase kinase kinase 2.
   
 
  0.512
ENSGMOP00000011648
Mitogen-activated protein kinase kinase kinase 22.
   
 
  0.512
ENSGMOP00000005558
Mitogen-activated protein kinase kinase kinase 19.
   
 
  0.508
ENSGMOP00000009303
LEO1 homolog, Paf1/RNA polymerase II complex component.
      
 0.503
ENSGMOP00000010385
annotation not available
      
 0.456
ENSGMOP00000004009
annotation not available
    
 
 0.415
ENSGMOP00000002987
annotation not available
      
 0.405
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.