STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009295annotation not available (665 aa)    
Predicted Functional Partners:
ENSGMOP00000009303
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.932
ENSGMOP00000006213
Guided entry of tail-anchored proteins factor 4.
   
 0.887
ENSGMOP00000006162
Guided entry of tail-anchored proteins factor 3, ATPase.
   
 0.831
ENSGMOP00000011583
annotation not available
   
 0.796
sec61b
SEC61 translocon beta subunit.
   
 0.778
ENSGMOP00000005330
annotation not available
   
  0.761
ENSGMOP00000005370
annotation not available
   
  0.761
ENSGMOP00000021096
Cell division cycle 16 homolog (S. cerevisiae).
    
 0.746
ENSGMOP00000007600
Anaphase promoting complex subunit 10.
    
 0.744
ENSGMOP00000008292
Anaphase promoting complex subunit 4.
    
 0.742
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.