STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009417Cerebellar degeneration-related protein 2a. (429 aa)    
Predicted Functional Partners:
ENSGMOP00000010552
Cerebellar degeneration-related protein 2-like.
  
 
  
0.631
CDR2L
Cerebellar degeneration related protein 2 like.
    
  
0.621
CDR2
Cerebellar degeneration related protein 2.
  
 
  
0.616
ENSGMOP00000017652
Kinectin 1.
    
   0.610
ENSGMOP00000010101
NDC80 kinetochore complex component.
      
 0.457
ENSGMOP00000009463
annotation not available
    
   0.450
samd4b
Sterile alpha motif domain containing 4B.
   
   0.408
ENSGMOP00000011741
Sterile alpha motif domain containing 4A.
   
   0.408
ENSGMOP00000006824
annotation not available
   
   0.402
CBS
Cystathionine beta-synthase.
      
 0.400
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.