STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009437AF4/FMR2 family, member 4. (1152 aa)    
Predicted Functional Partners:
ENSGMOP00000009653
Cyclin-dependent kinase 9 (CDC2-related kinase).
    
 0.991
ENSGMOP00000012268
Cyclin T1.
   
 0.962
ENSGMOP00000011158
ELL associated factor 2.
    
 0.956
ENSGMOP00000005547
Cyclin T2a.
   
 0.950
ENSGMOP00000006810
Cyclin T2b.
   
 0.950
ENSGMOP00000009508
Elongation factor, RNA polymerase II, 2.
   
 0.931
ENSGMOP00000017092
ELL associated factor 1.
    
 0.929
ENSGMOP00000009324
Elongation factor RNA polymerase II.
   
 0.914
ENSGMOP00000000759
MLLT3 super elongation complex subunit.
    
 0.905
ENSGMOP00000011804
MLLT1 super elongation complex subunit a.
    
 0.905
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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