STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009457Si:ch211-276c2.2. (857 aa)    
Predicted Functional Partners:
ENSGMOP00000000875
Kinesin light chain 1a.
    
 
 0.654
ENSGMOP00000007834
Kinesin light chain 3.
    
 
 0.654
ENSGMOP00000013004
annotation not available
    
 
 0.654
ENSGMOP00000019731
annotation not available
    
 
 0.654
ENSGMOP00000010834
Nephronophthisis 3.
    
 
 0.568
ENSGMOP00000014390
Amyloid beta (A4) precursor-like protein 2.
   
 
 0.448
ENSGMOP00000010806
annotation not available
    
 
 0.445
APP
Amyloid beta precursor protein.
   
 
 0.416
ENSGMOP00000003401
annotation not available
   
 
 0.416
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (22%) [HD]