STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009475annotation not available (233 aa)    
Predicted Functional Partners:
ENSGMOP00000001767
annotation not available
  
  
 0.663
ENSGMOP00000015935
annotation not available
  
 
 0.633
ENSGMOP00000017367
C1q and TNF related 2.
  
 
  0.627
ENSGMOP00000020951
annotation not available
  
  
  0.627
ENSGMOP00000000816
annotation not available
  
  
  0.626
ENSGMOP00000015146
annotation not available
  
  
  0.626
ENSGMOP00000017968
annotation not available
  
  
  0.626
ENSGMOP00000019696
annotation not available
  
  
  0.626
ENSGMOP00000008147
annotation not available
  
  
  0.619
ENSGMOP00000003141
Collagen, type XXVIII, alpha 2a.
  
 
 0.616
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.