STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009631Solute carrier family 33 member 1. (518 aa)    
Predicted Functional Partners:
ENSGMOP00000008063
beta-1,4-N-acetyl-galactosaminyl transferase 1b.
     
 0.856
ENSGMOP00000017734
Cytochrome b5 reductase 4.
    
  0.838
ENSGMOP00000001050
DnaJ heat shock protein family (Hsp40) member B9a.
  
   0.752
ENSGMOP00000007115
annotation not available
  
   0.752
ENSGMOP00000001918
Phosphopantothenoylcysteine synthetase.
 
    
 0.740
ENSGMOP00000008048
Lipoxygenase homology domains 1b.
    
  0.676
ENSGMOP00000018312
annotation not available
    
  0.676
ENSGMOP00000004548
annotation not available
  
   0.645
ENSGMOP00000017732
annotation not available
    
 0.622
ENSGMOP00000004806
Thymidine kinase 1, soluble.
    
 0.600
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.