STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009748Solute carrier family 25 member 21. (259 aa)    
Predicted Functional Partners:
tbx20
T-box transcription factor 20.
    
   0.775
ENSGMOP00000006824
annotation not available
    
 
 0.515
ENSGMOP00000004256
Deoxyribonuclease I-like 1-like.
    
   0.479
ENSGMOP00000016877
Deoxyribonuclease I.
    
   0.479
ENSGMOP00000019312
annotation not available
    
   0.479
ENSGMOP00000019339
Cytosolic thiouridylase subunit 1 homolog (S. pombe).
 
      0.475
ENSGMOP00000006952
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.441
ENSGMOP00000009418
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.441
ENSGMOP00000010688
annotation not available
      
 0.441
ENSGMOP00000017654
annotation not available
      
 0.441
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.