STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009870Lin-7 homolog A (C. elegans). (221 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.998
ENSGMOP00000017627
annotation not available
    
 0.998
ENSGMOP00000020280
Molybdenum cofactor synthesis 3.
    
 0.968
ENSGMOP00000014625
Peroxiredoxin 5.
   
 0.962
ENSGMOP00000018596
Membrane protein, palmitoylated 1.
    
 0.882
ENSGMOP00000000686
annotation not available
    
 0.836
ENSGMOP00000005962
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1.
    
 0.836
ENSGMOP00000013257
Calcium/calmodulin-dependent protein kinase II alpha.
    
 0.836
ENSGMOP00000007410
annotation not available
    
 0.828
ENSGMOP00000010873
annotation not available
    
 0.828
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.