STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009929SEC61 translocon alpha 1 subunit, like. (473 aa)    
Predicted Functional Partners:
ENSGMOP00000001097
SEC63 homolog, protein translocation regulator.
   
 
 0.998
rps2
Ribosomal protein S2.
  
 0.996
ENSGMOP00000008615
Mitochondrial ribosomal protein S5.
  
 0.994
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
 
 0.994
ENSGMOP00000001035
Ribosomal protein L9.
  
 
 0.993
ENSGMOP00000012827
Ribosomal protein L11.
  
 
 0.993
ENSGMOP00000014634
Mitochondrial ribosomal protein L22.
  
 
 0.993
sec61b
SEC61 translocon beta subunit.
   
 0.992
ENSGMOP00000015972
Ribosomal protein L23a.
  
 
 0.992
rps3
Ribosomal protein S3.
  
 
 0.991
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.