STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009940Glycine C-acetyltransferase. (408 aa)    
Predicted Functional Partners:
ENSGMOP00000006159
Sorbitol dehydrogenase.
  
 
 0.926
ENSGMOP00000019008
Threonine aldolase 1.
  
 
 0.923
ENSGMOP00000016890
annotation not available
  
 
 0.913
ENSGMOP00000006691
Sarcosine dehydrogenase.
  
 0.908
ENSGMOP00000003437
Glycine dehydrogenase (decarboxylating).
  
 
 0.905
LOC115534025
L-threonine 3-dehydrogenase, mitochondrial-like.
  
 
 0.905
ENSGMOP00000020535
L-threonine dehydrogenase 2.
  
 
 0.905
LOC115555125
Serine--pyruvate aminotransferase-like.
    
 0.893
ENSGMOP00000011257
Alanine--glyoxylate and serine--pyruvate aminotransferase b.
    
 0.893
pdpr
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.893
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.