STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000009970BRMS1 like transcriptional repressor b. (320 aa)    
Predicted Functional Partners:
ENSGMOP00000018683
annotation not available
   
 0.994
ENSGMOP00000020159
Translocase of outer mitochondrial membrane 20.
   
 0.994
sap30l
SAP30 like.
   
 0.917
HDAC2
Histone deacetylase 2.
   
 0.838
ENSGMOP00000003469
annotation not available
   
 0.838
ENSGMOP00000020442
Histone deacetylase 8.
   
 0.838
HDAC1
Histone deacetylase 1.
   
 0.838
ENSGMOP00000001496
Histone deacetylase 3.
   
 0.832
ENSGMOP00000005214
Retinoblastoma binding protein 4, like.
    
 0.801
ENSGMOP00000005216
annotation not available
    
 0.801
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.