STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
calm1Calmodulin 1. (149 aa)    
Predicted Functional Partners:
ENSGMOP00000014769
Myosin, light chain kinase a.
    
 0.967
ENSGMOP00000000686
annotation not available
   
 0.966
ENSGMOP00000005962
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1.
   
 0.966
ENSGMOP00000008618
annotation not available
    
 0.936
ENSGMOP00000014402
Protein phosphatase 3, catalytic subunit, beta isozyme.
    
 0.936
ENSGMOP00000001534
Calcium/calmodulin-dependent protein kinase IV.
   
 0.914
ENSGMOP00000001956
Calcium/calmodulin-dependent protein kinase Ib.
   
 0.909
ENSGMOP00000010912
Calcium/calmodulin-dependent protein kinase 1Db.
   
 0.909
ENSGMOP00000018135
Calcium/calmodulin-dependent protein kinase Ia.
   
 0.909
ENSGMOP00000020108
annotation not available
   
 0.909
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.