STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010010Nuclear receptor subfamily 5, group A, member 1a. (480 aa)    
Predicted Functional Partners:
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
 0.945
ENSGMOP00000001008
Nuclear receptor subfamily 0, group B, member 2a.
   
 0.889
CTNNB1
Catenin beta 1.
    
 
 0.838
ENSGMOP00000015387
annotation not available
    
 
 0.810
ENSGMOP00000004382
annotation not available
    
 0.769
ENSGMOP00000015152
annotation not available
    
 0.769
ENSGMOP00000017610
annotation not available
    
 0.769
ENSGMOP00000018777
Nuclear receptor coactivator 3.
    
 0.769
LOC115538019
SUMO-conjugating enzyme UBC9-like.
    
 0.664
ube2i
Ubiquitin conjugating enzyme E2 I.
    
 0.664
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (18%) [HD]