STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010011annotation not available (312 aa)    
Predicted Functional Partners:
ENSGMOP00000001629
Rab geranylgeranyltransferase subunit beta.
   
    0.549
YTHDC2
YTH domain containing 2.
   
 
 0.499
ENSGMOP00000002805
annotation not available
    
 
0.488
ENSGMOP00000005134
annotation not available
    
 
0.488
ENSGMOP00000008746
SRSF protein kinase 1a.
    
 
0.488
ENSGMOP00000012122
SRSF protein kinase 1b.
    
 
0.488
ENSGMOP00000015350
annotation not available
    
 
0.488
ENSGMOP00000020603
annotation not available
   
   0.470
ENSGMOP00000010044
annotation not available
 
      0.454
ENSGMOP00000001666
Serine and arginine rich splicing factor 2a.
    
 
 0.413
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.