STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010017annotation not available (412 aa)    
Predicted Functional Partners:
ENSGMOP00000009303
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.932
ENSGMOP00000005330
annotation not available
   
 0.879
ENSGMOP00000005370
annotation not available
   
 0.879
ENSGMOP00000010359
annotation not available
    
 0.803
ENSGMOP00000005311
annotation not available
   
 0.802
ENSGMOP00000011583
annotation not available
   
 0.796
ttc8
Tetratricopeptide repeat domain 8.
    
 0.784
ENSGMOP00000001662
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.774
ENSGMOP00000014476
Eukaryotic translation initiation factor 3, subunit E, b.
    
 0.769
ENSGMOP00000020188
annotation not available
   
 0.756
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.