STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010024annotation not available (1856 aa)    
Predicted Functional Partners:
ENSGMOP00000002944
Integrin, beta 5.
    
 0.797
ENSGMOP00000000540
Integrin, beta 6.
    
 0.795
ENSGMOP00000002985
Integrin, beta 1a.
    
 0.795
ENSGMOP00000017523
Integrin, beta 1b.
    
 0.795
ENSGMOP00000014489
Integrin, alpha 8.
    
 0.793
ENSGMOP00000007899
Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2.
   
0.788
ENSGMOP00000019029
Integrin, beta 8.
    
 0.785
ENSGMOP00000007675
annotation not available
    
  0.783
ENSGMOP00000017025
Integrin, alpha 9.
    
 0.781
ENSGMOP00000005783
Integrin, beta 4.
   
 0.780
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.