STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000010031Collagen beta(1-O)galactosyltransferase 1. (591 aa)    
Predicted Functional Partners:
ENSGMOP00000003500
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
   
0.897
ENSGMOP00000018360
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
   
0.897
ENSGMOP00000009515
annotation not available
  
  
 
0.778
ENSGMOP00000017844
annotation not available
  
  
 
0.777
ENSGMOP00000011330
annotation not available
  
  
 
0.775
ENSGMOP00000008735
2-oxoglutarate and iron-dependent oxygenase domain containing 2.
   
 0.655
ENSGMOP00000006644
Cerebral endothelial cell adhesion molecule.
  
  
 
0.648
ENSGMOP00000004481
Collagen, type VI, alpha 2.
   
  0.600
ENSGMOP00000015583
annotation not available
   
  0.600
ENSGMOP00000001767
annotation not available
    
  0.555
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.